Bioelectronics Neuropysiology and Engineering Lab (BNEL)#
This is the central documentation hub for software tools developed in the Bioelectronics Neuropysiology and Engineering Lab (BNEL) at Mayo Clinic. The tools are designed to facilitate the analysis of brain electrophysiology, behavior, and dynamics.
The Bioelectronics Neurophysiology and Engineering Laboratory, led by Gregory A. Worrell, M.D., Ph.D., is a multidisciplinary discovery and translational research laboratory focused on exploring the human brain. Learn more on the official website.
BrainMaze toolbox 
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BrainMaze is a modular Python toolbox for analyzing brain electrophysiology,
behavior, and dynamics. Each component is a standalone, pip-installable
package with its own documentation.
iEEG signal processing, sleep classification, slow-wave and CRP analysis.
Shared signal, file, and statistics utilities used across the toolbox.
Deep-learning tools for the toolbox, including seizure detection.
ZeroMQ communication wrappers for real-time acquisition pipelines.
MEF3 tools#
Open Python and gRPC toolchain for the Multiscale Electrophysiology Format
(MEF3). See the MEF3 tools page for details, including the
deprecated mef_tools library.
Read and write MEF3 data in Python. Replaces mef_tools.
gRPC streaming server with pre-caching for viewers and data-processing applications.
More#
Code examples and links to papers from the Bioelectronics Neurophysiology and Engineering Lab (BNEL) at Mayo Clinic.